STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92859.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa)    
Predicted Functional Partners:
acsA
Acetyl-coenzyme A synthetase AcsA.
   
 0.927
acs
Acetyl-coenzyme A synthetase Acs; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.927
mmsA
Methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.921
fadJ
Fatty acid oxidation complex FadJ subunit alpha; Includes enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase.
  
 0.918
frmA
S-(hydroxymethyl)glutathione dehydrogenase FrmA; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
 0.916
ackA
Acetate kinase AckA; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.916
speB1
Agmatinase SpeB; Belongs to the arginase family.
  
 0.915
AFO90446.1
2-hydroxy-3-oxopropionate reductase-like protein.
  
 
 0.913
mmsB
3-hydroxyisobutyrate dehydrogenase MmsB; Belongs to the HIBADH-related family.
 
 
 0.913
lcfB2
Long-chain-fatty-acid- CoA ligase IcfB.
  
  0.913
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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