STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92960.1Putative serine-protein kinase (anti-sigma-B factor). (148 aa)    
Predicted Functional Partners:
AFO92959.1
Putative anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.999
AFO93124.1
Putative response regulator.
 
 
 0.995
AFO90586.1
Heme NO binding domain-containing protein.
  
    0.987
fliG
Putative flagellar motor switch protein FliG.
  
    0.970
flgK
Flagellar hook-associated protein FlgK.
   
  
 0.967
AFO93202.1
Hypothetical protein.
   
    0.967
motA
Chemotaxis protein MotA.
   
    0.967
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.967
flgB
Putative flagellar basal-body rod protein FlgB.
   
    0.967
flbT
Flagellar biosynthesis repressor FlbT.
   
    0.967
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (18%) [HD]