Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFO90193.1 | AFO93260.1 | PGA1_c04590 | PGA1_c36290 | Putative threonine dehydratase. | Putative phenylserine dehydratase. | 0.928 |
| AFO90193.1 | ilvA | PGA1_c04590 | PGA1_c34900 | Putative threonine dehydratase. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.927 |
| AFO90193.1 | ltaE | PGA1_c04590 | PGA1_c25010 | Putative threonine dehydratase. | Low specificity L-threonine aldolase LtaE; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.910 |
| AFO90193.1 | tdh | PGA1_c04590 | PGA1_c34320 | Putative threonine dehydratase. | L-threonine 3-dehydrogenase Tdh. | 0.910 |
| AFO90193.1 | thrC | PGA1_c04590 | PGA1_c06310 | Putative threonine dehydratase. | Threonine synthase ThrC. | 0.946 |
| AFO90269.1 | AFO93111.1 | PGA1_c05370 | PGA1_c34750 | Polyketide synthase. | Putative aminotransferase class 3. | 0.895 |
| AFO90269.1 | hemA | PGA1_c05370 | PGA1_c20350 | Polyketide synthase. | 5-aminolevulinate synthase HemA. | 0.734 |
| AFO90269.1 | kbl | PGA1_c05370 | PGA1_c34330 | Polyketide synthase. | 2-amino-3-ketobutyrate coenzyme A ligase Kbl; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.735 |
| AFO90269.1 | tdh | PGA1_c05370 | PGA1_c34320 | Polyketide synthase. | L-threonine 3-dehydrogenase Tdh. | 0.520 |
| AFO93070.1 | kbl | PGA1_c34340 | PGA1_c34330 | Putative HTH-type transcriptional regulator. | 2-amino-3-ketobutyrate coenzyme A ligase Kbl; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.610 |
| AFO93070.1 | tdh | PGA1_c34340 | PGA1_c34320 | Putative HTH-type transcriptional regulator. | L-threonine 3-dehydrogenase Tdh. | 0.559 |
| AFO93111.1 | AFO90269.1 | PGA1_c34750 | PGA1_c05370 | Putative aminotransferase class 3. | Polyketide synthase. | 0.895 |
| AFO93111.1 | tdh | PGA1_c34750 | PGA1_c34320 | Putative aminotransferase class 3. | L-threonine 3-dehydrogenase Tdh. | 0.586 |
| AFO93111.1 | thrC | PGA1_c34750 | PGA1_c06310 | Putative aminotransferase class 3. | Threonine synthase ThrC. | 0.493 |
| AFO93260.1 | AFO90193.1 | PGA1_c36290 | PGA1_c04590 | Putative phenylserine dehydratase. | Putative threonine dehydratase. | 0.928 |
| AFO93260.1 | ilvA | PGA1_c36290 | PGA1_c34900 | Putative phenylserine dehydratase. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.924 |
| AFO93260.1 | ltaE | PGA1_c36290 | PGA1_c25010 | Putative phenylserine dehydratase. | Low specificity L-threonine aldolase LtaE; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.910 |
| AFO93260.1 | tdh | PGA1_c36290 | PGA1_c34320 | Putative phenylserine dehydratase. | L-threonine 3-dehydrogenase Tdh. | 0.910 |
| AFO93260.1 | thrC | PGA1_c36290 | PGA1_c06310 | Putative phenylserine dehydratase. | Threonine synthase ThrC. | 0.946 |
| hemA | AFO90269.1 | PGA1_c20350 | PGA1_c05370 | 5-aminolevulinate synthase HemA. | Polyketide synthase. | 0.734 |
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