STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ04090.1COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (293 aa)    
Predicted Functional Partners:
EDQ04563.1
Radical SAM domain protein; COG0535 Predicted Fe-S oxidoreductases.
     0.939
EDQ03977.1
COG0591 Na+/proline symporter.
 
     0.776
EDQ04834.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
    
   0.774
EDQ03500.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
   0.774
EDQ03810.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
   0.774
EDQ05393.1
Hypothetical protein.
  
  
 0.730
EDQ06332.1
Putative deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.730
EDQ04089.1
CBS domain protein; COG4536 Putative Mg2+ and Co2+ transporter CorB.
       0.646
EDQ03892.1
Glycosyl transferase, putative; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
   0.570
EDQ06681.1
Antioxidant, AhpC/Tsa family, putative; COG0450 Peroxiredoxin.
   
   0.528
Your Current Organism:
Sulfitobacter indolifex
NCBI taxonomy Id: 391624
Other names: Oceanibulbus indolifex HEL-45, S. indolifex HEL-45, Sulfitobacter indolifex HEL-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.