STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ04191.1Major tail protein, TP901-1 family; COG5437 Predicted secreted protein. (140 aa)    
Predicted Functional Partners:
EDQ04187.1
Hypothetical protein.
 
 
   0.998
EDQ04192.1
Hypothetical protein.
 
 
   0.998
EDQ04184.1
Hypothetical protein.
 
 
   0.997
EDQ04186.1
Hypothetical protein.
 
 
   0.997
EDQ04193.1
Head-tail adaptor, putative; COG5614 Bacteriophage head-tail adaptor.
 
 
   0.997
EDQ04194.1
Hypothetical protein.
 
   0.997
EDQ04195.1
Major capsid protein, HK97 family; COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
 
   0.995
EDQ04198.1
Phage portal protein, putative; COG4695 Phage-related protein.
 
   0.994
EDQ04190.1
Hypothetical protein.
 
    0.968
EDQ04188.1
COG5281 Phage-related minor tail protein.
 
     0.965
Your Current Organism:
Sulfitobacter indolifex
NCBI taxonomy Id: 391624
Other names: Oceanibulbus indolifex HEL-45, S. indolifex HEL-45, Sulfitobacter indolifex HEL-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.