Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM75509.1 | EDM75623.1 | PPSIR1_31548 | PPSIR1_00230 | Hypothetical protein. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.756 |
EDM75509.1 | EDM77750.1 | PPSIR1_31548 | PPSIR1_38836 | Hypothetical protein. | COG4289 Uncharacterized protein conserved in bacteria. | 0.487 |
EDM75509.1 | EDM79289.1 | PPSIR1_31548 | PPSIR1_04093 | Hypothetical protein. | Terpene synthase, metal-binding protein. | 0.746 |
EDM75509.1 | EDM79441.1 | PPSIR1_31548 | PPSIR1_34982 | Hypothetical protein. | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.721 |
EDM75509.1 | EDM80272.1 | PPSIR1_31548 | PPSIR1_36517 | Hypothetical protein. | Probable aminotransferase; COG0520 Selenocysteine lyase. | 0.450 |
EDM75509.1 | EDM81731.1 | PPSIR1_31548 | PPSIR1_04673 | Hypothetical protein. | Terpene synthase, metal-binding protein. | 0.761 |
EDM75509.1 | EDM81891.1 | PPSIR1_31548 | PPSIR1_05473 | Hypothetical protein. | Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases. | 0.754 |
EDM75509.1 | EDM81929.1 | PPSIR1_31548 | PPSIR1_05663 | Hypothetical protein. | Hypothetical protein. | 0.632 |
EDM75509.1 | EDM81930.1 | PPSIR1_31548 | PPSIR1_05668 | Hypothetical protein. | Hypothetical protein. | 0.698 |
EDM75622.1 | EDM75623.1 | PPSIR1_00225 | PPSIR1_00230 | Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.773 |
EDM75623.1 | EDM75509.1 | PPSIR1_00230 | PPSIR1_31548 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.756 |
EDM75623.1 | EDM75622.1 | PPSIR1_00230 | PPSIR1_00225 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. | 0.773 |
EDM75623.1 | EDM77750.1 | PPSIR1_00230 | PPSIR1_38836 | Hypothetical protein; COG0457 FOG: TPR repeat. | COG4289 Uncharacterized protein conserved in bacteria. | 0.722 |
EDM75623.1 | EDM79289.1 | PPSIR1_00230 | PPSIR1_04093 | Hypothetical protein; COG0457 FOG: TPR repeat. | Terpene synthase, metal-binding protein. | 0.695 |
EDM75623.1 | EDM79441.1 | PPSIR1_00230 | PPSIR1_34982 | Hypothetical protein; COG0457 FOG: TPR repeat. | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.743 |
EDM75623.1 | EDM80272.1 | PPSIR1_00230 | PPSIR1_36517 | Hypothetical protein; COG0457 FOG: TPR repeat. | Probable aminotransferase; COG0520 Selenocysteine lyase. | 0.614 |
EDM75623.1 | EDM81731.1 | PPSIR1_00230 | PPSIR1_04673 | Hypothetical protein; COG0457 FOG: TPR repeat. | Terpene synthase, metal-binding protein. | 0.683 |
EDM75623.1 | EDM81891.1 | PPSIR1_00230 | PPSIR1_05473 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases. | 0.757 |
EDM75623.1 | EDM81929.1 | PPSIR1_00230 | PPSIR1_05663 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.745 |
EDM75623.1 | EDM81930.1 | PPSIR1_00230 | PPSIR1_05668 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.736 |
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