STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM81776.1COG0824 Predicted thioesterase. (170 aa)    
Predicted Functional Partners:
EDM73516.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.980
EDM78859.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.980
EDM73611.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.980
EDM73625.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.980
EDM81218.1
Nonribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
 0.973
EDM79158.1
COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.963
EDM79159.1
Putative multi-domain beta keto-acyl synthase; COG0236 Acyl carrier protein.
  
 0.921
EDM79160.1
Putative multi-domain beta keto-acyl synthase; COG3321 Polyketide synthase modules and related proteins.
  
 0.921
EDM78860.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.860
EDM80369.1
Non-ribosomal peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.859
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.