Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM74857.1 | EDM76331.1 | PPSIR1_20034 | PPSIR1_18532 | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | 0.696 |
EDM74857.1 | EDM79180.1 | PPSIR1_20034 | PPSIR1_27478 | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | NdvB protein; COG3459 Cellobiose phosphorylase. | 0.746 |
EDM74857.1 | EDM79456.1 | PPSIR1_20034 | PPSIR1_35057 | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.897 |
EDM74857.1 | EDM80177.1 | PPSIR1_20034 | PPSIR1_36042 | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.427 |
EDM74857.1 | EDM81883.1 | PPSIR1_20034 | PPSIR1_05433 | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | PAS/PAC sensor signal transduction histidine kinase; COG2931 RTX toxins and related Ca2+-binding proteins. | 0.664 |
EDM76331.1 | EDM74857.1 | PPSIR1_18532 | PPSIR1_20034 | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.696 |
EDM76331.1 | EDM79180.1 | PPSIR1_18532 | PPSIR1_27478 | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | NdvB protein; COG3459 Cellobiose phosphorylase. | 0.782 |
EDM76331.1 | EDM79456.1 | PPSIR1_18532 | PPSIR1_35057 | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.428 |
EDM76331.1 | EDM80177.1 | PPSIR1_18532 | PPSIR1_36042 | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | Hypothetical protein. | 0.697 |
EDM76331.1 | EDM81883.1 | PPSIR1_18532 | PPSIR1_05433 | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | PAS/PAC sensor signal transduction histidine kinase; COG2931 RTX toxins and related Ca2+-binding proteins. | 0.586 |
EDM78290.1 | EDM80177.1 | PPSIR1_08926 | PPSIR1_36042 | Hypothetical protein. | Hypothetical protein. | 0.470 |
EDM78290.1 | EDM81883.1 | PPSIR1_08926 | PPSIR1_05433 | Hypothetical protein. | PAS/PAC sensor signal transduction histidine kinase; COG2931 RTX toxins and related Ca2+-binding proteins. | 0.446 |
EDM78290.1 | EDM81885.1 | PPSIR1_08926 | PPSIR1_05443 | Hypothetical protein. | Glycosyl transferase, group 1; COG0438 Glycosyltransferase. | 0.628 |
EDM79180.1 | EDM74857.1 | PPSIR1_27478 | PPSIR1_20034 | NdvB protein; COG3459 Cellobiose phosphorylase. | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.746 |
EDM79180.1 | EDM76331.1 | PPSIR1_27478 | PPSIR1_18532 | NdvB protein; COG3459 Cellobiose phosphorylase. | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | 0.782 |
EDM79180.1 | EDM79456.1 | PPSIR1_27478 | PPSIR1_35057 | NdvB protein; COG3459 Cellobiose phosphorylase. | Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.818 |
EDM79180.1 | EDM80177.1 | PPSIR1_27478 | PPSIR1_36042 | NdvB protein; COG3459 Cellobiose phosphorylase. | Hypothetical protein. | 0.739 |
EDM79180.1 | EDM81883.1 | PPSIR1_27478 | PPSIR1_05433 | NdvB protein; COG3459 Cellobiose phosphorylase. | PAS/PAC sensor signal transduction histidine kinase; COG2931 RTX toxins and related Ca2+-binding proteins. | 0.483 |
EDM79456.1 | EDM74857.1 | PPSIR1_35057 | PPSIR1_20034 | Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.897 |
EDM79456.1 | EDM76331.1 | PPSIR1_35057 | PPSIR1_18532 | Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like protein. | 0.428 |
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