STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM76219.1COG0515 Serine/threonine protein kinase. (888 aa)    
Predicted Functional Partners:
EDM78993.1
Sensor histidine kinase; COG0515 Serine/threonine protein kinase.
   
0.838
EDM78546.1
Probable serine/threonine kinase protein with two-component sensor domain; COG0515 Serine/threonine protein kinase.
   
0.838
EDM81169.1
Sensor histidine kinase; COG0515 Serine/threonine protein kinase.
   
0.838
EDM77716.1
Predicted ATPase; COG0515 Serine/threonine protein kinase.
   
0.838
EDM75906.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
   
 0.834
EDM77556.1
COG0642 Signal transduction histidine kinase.
   
 0.828
EDM73637.1
COG0642 Signal transduction histidine kinase.
   
 0.828
EDM79877.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.828
EDM79749.1
Two-component sensor histidine kinase protein; COG2202 FOG: PAS/PAC domain.
   
 0.828
EDM75106.1
Putative adenylate cyclase; COG1716 FOG: FHA domain.
  
 0.801
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.