STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM79708.1COG3714 Predicted membrane protein. (210 aa)    
Predicted Functional Partners:
EDM79709.1
Hypothetical protein; COG0240 Glycerol-3-phosphate dehydrogenase.
       0.773
EDM79710.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.773
EDM79711.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.541
EDM76932.1
Hypothetical protein.
  
     0.446
EDM80982.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.444
EDM79508.1
Hypothetical protein.
  
     0.426
EDM75758.1
Putative sphingosine-1-phosphate lyase; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
     0.420
EDM79707.1
Hypothetical protein.
       0.410
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.