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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM75957.1Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (174 aa)    
Predicted Functional Partners:
EDM75956.1
Possible lyase; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.855
EDM81874.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.773
EDM77154.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.764
EDM73535.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.757
EDM81466.1
Transcriptional regulator, AraC family protein; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.749
EDM77005.1
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.747
EDM74886.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.742
EDM73996.1
COG0067 Glutamate synthase domain 1.
    
  0.722
EDM81245.1
DarR; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.713
EDM75921.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.695
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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