STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM81627.1Transporter, cation channel family protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (335 aa)    
Predicted Functional Partners:
EDM81628.1
HSP90; COG0326 Molecular chaperone, HSP90 family.
       0.773
EDM81626.1
Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
       0.661
EDM81224.1
Ribosomal RNA small subunit methyltransferase B; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.600
EDM73789.1
Competence-damaged protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
 0.591
EDM81629.1
Hypothetical protein.
       0.561
EDM80019.1
K+ transporter Trk; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.556
EDM80460.1
COG0168 Trk-type K+ transport systems, membrane components.
  
 
 0.556
EDM80940.1
Molybdopterin biosynthesis MoaE / thiamineS; COG1977 Molybdopterin converting factor, small subunit.
   
    0.542
EDM74485.1
COG0007 Uroporphyrinogen-III methylase.
  
    0.523
EDM81625.1
HDIG domain protein; COG4341 Predicted HD phosphohydrolase.
       0.490
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.