STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM76096.1Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
EDM73705.1
Probable transcriptional regulator LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.747
EDM77009.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.735
EDM81495.1
Probable transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.732
EDM73975.1
Putative transcriptional regulator protein, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.728
EDM75988.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.727
EDM76097.1
Methyltransferase type 12; COG0500 SAM-dependent methyltransferases.
 
     0.726
EDM77262.1
Regulatory protein, LysR:LysR, substrate-binding; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
EDM75784.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.723
EDM75279.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.719
EDM76095.1
Hypothetical protein.
       0.714
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.