STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM80445.1COG4282 Protein involved in beta-1,3-glucan synthesis. (191 aa)    
Predicted Functional Partners:
EDM80446.1
Very long chain acyl-CoA dehydrogenase-related protein; COG1960 Acyl-CoA dehydrogenases.
       0.530
EDM79662.1
COG2025 Electron transfer flavoprotein, alpha subunit.
  
     0.503
EDM76251.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.501
EDM76747.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
     0.485
EDM81088.1
Hypothetical protein.
  
     0.471
EDM75205.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.471
EDM81919.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.467
EDM78142.1
Hypothetical protein.
  
     0.467
EDM75206.1
Hypothetical protein.
  
     0.458
EDM77897.1
Hypothetical protein.
  
     0.443
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.