STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM76257.1Peptidase S1 and S6, chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. (428 aa)    
Predicted Functional Partners:
EDM76194.1
Hypothetical protein.
  
     0.764
EDM79205.1
Hypothetical protein.
  
 
   0.764
EDM75724.1
Hypothetical protein.
  
 
   0.763
EDM74668.1
Thrombospondin type 3 repeat family protein.
  
     0.756
EDM81247.1
Hypothetical protein.
  
     0.749
EDM76068.1
Hypothetical protein.
  
  0.743
EDM79863.1
Putative lipoprotein.
  
     0.726
EDM77064.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
   0.720
EDM76249.1
Hypothetical protein.
  
     0.714
EDM80137.1
COG5083 Uncharacterized protein involved in plasmid maintenance.
  
     0.705
Your Current Organism:
Plesiocystis pacifica
NCBI taxonomy Id: 391625
Other names: P. pacifica SIR-1, Plesiocystis pacifica SIR-1, Plesiocystis pacifica str. SIR-1, Plesiocystis pacifica strain SIR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.