STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI66159.1Putative quinone oxidoreductase. (322 aa)    
Predicted Functional Partners:
AGI66158.1
Putative ubiquinone biosynthesis protein COQ9.
  
   0.912
rpsU2
Ribsomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.503
AGI66160.1
Short-chain dehydrogenase/reductase; Alternative name(s): SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.464
fabB
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.427
AGI69671.1
Hypothetical protein; Non-ribosomal peptide synthase subunit-like.
  
  
 0.422
AGI67391.1
Putative NADP-dependent oxidoreductase.
 
  
 0.405
fabF1
3-oxoacyl-[acyl-carrier-protein] synthase FabF; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.402
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.