STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI66737.1Efflux transporter MFP-component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (359 aa)    
Predicted Functional Partners:
AGI66738.1
RND/MFP-family efflux tansporter RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.969
AGI70126.1
Hypothetical protein DUF214.
  
 
 0.859
AGI68951.1
OEP family efflux transporter; Alternative name(s): outer membrane efflux protein.
 
 
 0.768
AGI69722.1
Multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.604
AGI67060.1
Putative RND family efflux transporter transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.578
AGI66736.1
HTH-type transcriptional regulator.
     
 0.565
AGI69610.1
Putative multidrug efflux transporter RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.551
AGI67788.1
Putative AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.534
AGI69260.1
ABC transporter DevA-family ATP-binding protein.
  
 
 0.462
AGI65961.1
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.460
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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