STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI67040.1Phage integrase family protein. (198 aa)    
Predicted Functional Partners:
AGI67039.1
Hypothetical protein.
       0.723
AGI68953.1
Hypothetical protein.
  
     0.690
AGI68546.1
FlgE-like predicted flagellar basal body rod protein.
  
    0.571
AGI68532.1
Putative DUF1566 family protein.
  
     0.522
AGI68686.1
Putative DUF3768 family protein.
 
     0.463
AGI68540.1
FlgK-like flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
     0.460
AGI69908.1
Putative IS630-family transposase.
  
     0.448
AGI68505.1
FliL-like flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.437
AGI68534.1
MotB-like flagellar motor protein.
  
     0.434
AGI67650.1
Putative IS630-family transposase.
  
     0.407
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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