STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI67302.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
hflK
Protein hflK; HflC and HflK could encode or regulate a protease.
     
 0.811
hflC
Putative protein hflC; HflC and HflK could regulate a protease.
     
 0.809
AGI67213.1
Hypothetical protein.
 
     0.642
gor
Glutathione reductase; Maintains high levels of reduced glutathione.
       0.642
AGI67826.1
Hypothetical protein.
  
     0.630
AGI68407.1
Hypothetical protein.
  
     0.526
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.504
AGI67292.1
Hypothetical protein.
  
     0.487
AGI68359.1
Hypothetical protein; Related to acetyltransferase.
  
     0.480
AGI66983.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.