STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI68409.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
AGI69944.1
Hypothetical protein.
  
     0.742
AGI66218.1
Hypothetical protein; Protease inhibitor-like.
  
     0.695
AGI68398.1
Putative Y2126 family protein.
  
     0.676
AGI66239.1
Hypothetical protein.
  
     0.675
AGI68399.1
Putative Y2126 family protein.
  
     0.595
AGI69918.1
Hypothetical protein.
  
     0.551
AGI67898.1
Hypothetical protein; Related to thioesterase.
  
     0.533
AGI69299.1
Hypothetical protein.
  
     0.503
tktA
Transketolase TktA; Belongs to the transketolase family.
       0.497
AGI66980.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.