STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI68444.1Putative DSBA oxidoreductase. (290 aa)    
Predicted Functional Partners:
AGI68443.1
TPR-repeat containing protein.
  
    0.858
AGI70062.1
Hypothetical protein; Related to thioredoxin.
 
   
 0.678
amiC2
Putative N-acetylmuramoyl-L-alanine amidase amiC.
  
  
 0.656
AGI68442.1
Aminotransferase.
  
    0.649
AGI68014.1
Hypothetical protein.
 
 
 0.579
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.533
AGI65949.1
Hypothetical protein.
 
   
 0.458
ccmG
Thiol:disulfide interchange protein dsbE-like protein.
 
 
 0.458
ftsW
Cell division protein ftsW; Belongs to the SEDS family.
 
  
 0.437
AGI69921.1
Putative glutathione S-transferase.
  
  
 0.403
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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