STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI69655.1Putative ABC-transporter permease protein. (288 aa)    
Predicted Functional Partners:
AGI69654.1
Putative ABC-transporter permease protein.
 
 0.993
AGI69658.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.980
AGI69659.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.980
AGI69661.1
Putative ABC transporter inner membrane component.
 
 0.980
AGI69663.1
Putative ABC transporter extracellular solute binding protein.
 
  0.975
AGI69660.1
Putative ABC transporter inner membrane component.
 
  
 
0.936
AGI69662.1
Hypothetical protein.
 
    0.847
AGI67654.1
ABC transporter permease protein.
 
 
 0.836
glpR
Glycerol-3-phosphate regulon repressor.
 
     0.751
AGI69711.1
ABC transporter permease protein.
 
 
 0.714
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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