STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI69708.1Putative oxidoreductase. (378 aa)    
Predicted Functional Partners:
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.904
AGI69706.1
Putative tagatose-6-phosphate ketose/aldose isomerase.
 
    0.886
AGI69710.1
ABC transporter periplasmatic solute-binding protein.
 
     0.882
AGI69705.1
Alternative name(s): GlcNAc kinase.
 
   
 0.840
kbaZ
Putative D-tagatose-1,6-bisphosphate aldolase subunit kbaZ.
 
     0.836
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA.
 
    0.832
AGI69707.1
Putative sugar isomerase.
       0.792
AGI69709.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
AGI69714.1
Beta-hexosaminidase; 'alternative name(s): N-acetyl-beta-glucosaminidase; beta-N-acetylhexosaminidase'.
 
    0.731
AGI69712.1
ABC transporter permease protein.
 
     0.730
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.