STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI69997.1Hypothetical protein; Containing glycosyl transferase family 14-like domain. (564 aa)    
Predicted Functional Partners:
AGI69996.1
Hypothetical protein.
 
     0.965
AGI69998.1
Hypothetical protein.
 
   
 0.962
AGI69999.1
Hypothetical protein.
 
   
 0.937
AGI70003.1
Putative ABC-2 type transporter.
 
     0.867
AGI68800.1
Hypothetical protein.
  
     0.774
AGI67315.1
Hypothetical protein.
  
     0.772
AGI68851.1
Hypothetical protein.
  
     0.772
AGI66385.1
Hypothetical protein.
  
     0.769
AGI66986.1
Hypothetical protein.
  
     0.768
AGI66240.1
Hypothetical protein.
  
     0.767
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.