STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI70021.1Putative peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (547 aa)    
Predicted Functional Partners:
AGI70022.1
Putative peptide ABC transporter permease protein.
  
 0.968
AGI70023.1
Putative peptide ABC transporter permease protein.
 
  
 0.968
AGI70020.1
Putative peptide ABC transporter periplasmatic substrate-binding protein.
 
  
 0.916
AGI69274.1
ABC transporter inner membrane component.
  
 0.785
AGI66512.1
Cobalt transport protein-like.
  
 
 0.783
AGI66945.1
Peptide ABC transporter permease protein.
  
 0.774
AGI66790.1
Peptide ABC transporter permease protein.
  
 0.712
AGI66789.1
Peptide ABC transporter permease protein.
 
  
 0.638
AGI66950.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.611
AGI67683.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.609
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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