STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_0203PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7194 ABC transporter permease protein. (265 aa)    
Predicted Functional Partners:
Veis_0201
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bja:bll7196 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.935
Veis_0200
PFAM: extracellular solute-binding protein, family 1; KEGG: bja:bll7197 ABC transporter substrate-binding protein.
 
  
 0.912
Veis_0202
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7195 ABC transporter permease protein.
  
0.889
Veis_4688
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2371 binding-protein-dependent transport systems inner membrane component.
  
 0.854
Veis_4323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2408 spermidine/putrescine ABC transporter, permease protein, putative.
  
 0.853
Veis_0207
PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7190 putative sarcosine oxidase beta subunit.
 
     0.845
Veis_3191
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_0333 polyamine ABC transporter, permease protein.
  
 0.839
Veis_4043
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
  
 0.822
Veis_0204
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2706 putative FAD dependent oxidoreductase.
 
     0.821
Veis_0206
PFAM: glucose-inhibited division protein A; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase.
 
     0.819
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.