STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_1908PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A1543 ABC-type transporter, ATPase component: HAAT family. (254 aa)    
Predicted Functional Partners:
Veis_1906
PFAM: inner-membrane translocator; KEGG: reh:H16_A1541 ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.958
Veis_1905
PFAM: inner-membrane translocator; KEGG: reh:H16_A1540 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.948
Veis_1907
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A1542 ABC-type transporter, ATPase component: HAAT family.
 
  
0.878
Veis_3838
PFAM: inner-membrane translocator; KEGG: bja:blr3616 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.840
Veis_4648
PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.835
Veis_4011
PFAM: inner-membrane translocator; KEGG: rpb:RPB_2083 inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.832
Veis_4469
PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_6645 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.824
Veis_0897
PFAM: inner-membrane translocator; KEGG: rpd:RPD_1849 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.813
Veis_3000
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3171 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.804
Veis_3837
PFAM: inner-membrane translocator; KEGG: gka:GK1660 branched-chain amino acid ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.804
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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