Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Veis_2011PFAM: extracellular solute-binding protein, family 1; KEGG: mlo:mlr7261 ABC transporter binding protein. (480 aa)    
Predicted Functional Partners:
Veis_2013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01626 putative permease ABC transporter protein.
 
 
 0.893
Veis_2010
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: rde:RD1_3641 ery operon repressor, putative.
 
   
 0.890
Veis_2012
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01627 putative permease ABC transporter protein.
 
 
 0.881
Veis_3169
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01296 ABC-type sugar transport system, permease component.
 
 
 0.774
Veis_3170
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01295 ABC-type sugar transport system, permease components.
 
 
 0.753
Veis_2017
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: sme:SMc01622 putative phosphoglycerate dehydrogenase.
 
     0.745
Veis_2014
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01625 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.732
Veis_2015
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01624 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.675
Veis_2032
PFAM: class II aldolase/adducin family protein; KEGG: mlo:mlr3601 hypothetical protein.
  
     0.622
Veis_2016
PFAM: carbohydrate kinase, FGGY; KEGG: mlo:mlr7268 xylulose kinase.
 
   
 0.615
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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