STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_2012PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01627 putative permease ABC transporter protein. (310 aa)    
Predicted Functional Partners:
Veis_2013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01626 putative permease ABC transporter protein.
 
 
 0.960
Veis_2015
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01624 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.941
Veis_2014
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01625 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.935
Veis_2011
PFAM: extracellular solute-binding protein, family 1; KEGG: mlo:mlr7261 ABC transporter binding protein.
 
 
 0.881
Veis_3455
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90125 putative permease transporter component.
 
 
 0.873
Veis_0946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2694 binding-protein-dependent transport systems inner membrane component.
 
 
 0.872
Veis_3449
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_2592 putative ABC transport system permease protein.
 
 
 0.872
Veis_4549
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0354 putative binding-protein-dependent transport protein.
 
 
 0.872
Veis_0802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6354 ABC transporter permease protein.
 
 
 0.871
Veis_1241
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3527 binding-protein-dependent transport systems inner membrane component.
 
 
 0.871
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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