Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Veis_3000PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3171 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (358 aa)    
Predicted Functional Partners:
Veis_3001
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3172 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.965
Veis_2999
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3794 ABC transporter related.
  
 0.957
Veis_2998
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3793 ABC transporter related.
  
 0.947
Veis_1873
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A2623 ABC-type transporter, ATPase component: HAAT family.
  
 0.851
Veis_0315
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein.
  
 0.845
Veis_3834
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB1157 high-affinity branched-chain amino acid transport ATP-binding protein.
  
 0.845
Veis_4914
PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_2411 extracellular ligand-binding receptor.
 
  
 0.845
Veis_4919
PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_2411 extracellular ligand-binding receptor.
 
  
 0.845
Veis_1045
PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_2810 extracellular ligand-binding receptor.
 
  
 0.843
Veis_0290
PFAM: inner-membrane translocator; KEGG: gsu:GSU1733 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.841
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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