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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_3207PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1397 ABC transporter related. (230 aa)    
Predicted Functional Partners:
Veis_3209
PFAM: inner-membrane translocator; KEGG: pol:Bpro_1395 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
Veis_3210
PFAM: inner-membrane translocator; KEGG: pol:Bpro_1394 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
Veis_3211
KEGG: pol:Bpro_1393 twin-arginine translocation pathway signal.
 
 
 0.985
Veis_4908
PFAM: inner-membrane translocator; KEGG: reh:H16_B0075 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.965
Veis_4910
KEGG: psb:Psyr_2205 extracellular ligand-binding receptor.
 
 
 0.960
Veis_3208
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1396 ABC transporter related.
 
 
0.959
Veis_4909
PFAM: inner-membrane translocator; KEGG: psb:Psyr_2204 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
Veis_0350
PFAM: inner-membrane translocator; KEGG: rpd:RPD_4291 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
Veis_0349
PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_3020 putative UreA/short-chain amide transport system substrate-binding protein.
 
 
 0.950
Veis_4906
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_2414 branched-chain amino acid ABC transporter, ATP-binding protein, putative.
  
  
 
0.905
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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