STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_5001PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: pol:Bpro_1480 xanthine dehydrogenase. (828 aa)    
Predicted Functional Partners:
Veis_5002
PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pol:Bpro_1481 molybdopterin dehydrogenase, FAD-binding.
 0.999
Veis_1336
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.977
Veis_4544
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_0578 (2Fe-2S)-binding.
     0.973
Veis_2520
PFAM: adenosine/AMP deaminase; KEGG: bch:Bcen2424_5260 adenosine deaminase.
 
  
 0.928
Veis_1083
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
 
  
 0.926
Veis_0812
PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_A1449 putative transmembrane oxidoreductase protein.
  
 
 0.913
Veis_4387
PFAM: Transthyretin; KEGG: pol:Bpro_1426 transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.802
Veis_0780
PFAM: protein of unknown function DUF989; KEGG: pol:Bpro_1430 putative transmembrane protein.
 
     0.747
Veis_4534
PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 protein of unknown function DUF182.
 
  
 0.746
Veis_4388
PFAM: polysaccharide deacetylase; KEGG: pol:Bpro_1424 polysaccharide deacetylase.
 
     0.658
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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