STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_05125ATPase-like protein; COG0642 Signal transduction histidine kinase. (860 aa)    
Predicted Functional Partners:
S7S_05120
AraC family transcriptional regulator; COG0784 FOG: CheY-like receiver.
 
 0.993
S7S_01325
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.986
S7S_09045
Sensor histidine kinase/respose regulator; COG0642 Signal transduction histidine kinase.
 
 
0.974
S7S_12365
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain-containing protein; COG0642 Signal transduction histidine kinase.
 
 
0.969
S7S_17920
Two-component hybrid chemotactic sensor and regulator; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.967
S7S_09065
Sensory box protein/response regulator; COG0784 FOG: CheY-like receiver.
 
 0.960
S7S_15460
Na-solute symporter/sensory box histidinekinase; COG0591 Na+/proline symporter.
 
 
0.959
S7S_08120
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 0.928
S7S_13975
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 
0.927
S7S_05025
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.896
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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