STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_05135Hypothetical protein. (973 aa)    
Predicted Functional Partners:
S7S_05130
COG4719 Uncharacterized protein conserved in bacteria.
 
     0.878
S7S_11350
Hypothetical protein.
   
   0.752
S7S_05140
Hypothetical protein.
 
    
0.661
S7S_05150
Conserved repeat domain protein.
 
    
0.599
S7S_05155
Conserved repeat domain protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
    
0.587
S7S_12615
Hypothetical protein.
  
     0.583
S7S_05145
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
     0.574
S7S_12385
COG4453 Uncharacterized protein conserved in bacteria.
  
     0.491
S7S_11130
Hypothetical protein.
  
     0.476
S7S_02610
Putative plasmid protein; COG4456 Virulence-associated protein and related proteins.
  
     0.451
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.