STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_07485Hypothetical protein; COG0457 FOG: TPR repeat. (1005 aa)    
Predicted Functional Partners:
S7S_07495
Hypothetical protein.
 
     0.963
S7S_07490
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.949
S7S_07480
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.913
S7S_07460
Putative adventurous gliding motility protein S; COG0848 Biopolymer transport protein.
 
  
 0.862
S7S_07465
COG0848 Biopolymer transport protein.
 
  
 0.862
S7S_07470
COG0811 Biopolymer transport proteins.
 
  
 0.858
S7S_15235
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
 
  
 0.853
S7S_07455
Hypothetical protein.
 
   
 0.849
S7S_15265
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.784
S7S_15270
Hypothetical protein.
 
     0.784
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.