Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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[Homology]
Score
S7S_08050COG2062 Phosphohistidine phosphatase SixA. (156 aa)    
Predicted Functional Partners:
gpsA
COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.837
S7S_08055
Thioesterase; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
       0.711
S7S_01165
COG3098 Uncharacterized protein conserved in bacteria.
  
     0.631
S7S_08035
Hypothetical protein.
       0.554
S7S_08040
Hypothetical protein; COG1090 Predicted nucleoside-diphosphate sugar epimerase.
       0.554
topA
DNA topoisomerase I subunit omega; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus rem [...]
 
     0.498
S7S_11945
Ribonuclease T; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
   
 0.468
S7S_06735
COG3089 Uncharacterized protein conserved in bacteria; Belongs to the UPF0270 family.
  
     0.407
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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