Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S7S_08085Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (275 aa)    
Predicted Functional Partners:
S7S_08090
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
     
 0.839
S7S_08075
Hypothetical protein.
 
     0.693
S7S_08080
COG0708 Exonuclease III.
       0.655
S7S_08095
COG2030 Acyl dehydratase.
    
  0.552
S7S_07835
COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
 
   
 0.510
S7S_05310
COG3321 Polyketide synthase modules and related proteins.
  
 0.487
S7S_08065
Hypothetical protein.
       0.431
S7S_08070
Sensory box protein/response regulator; COG0784 FOG: CheY-like receiver.
       0.430
S7S_15185
COG1960 Acyl-CoA dehydrogenases.
  
 
  0.414
S7S_08350
COG1946 Acyl-CoA thioesterase.
 
  
  0.413
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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