STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_08480COG5640 Secreted trypsin-like serine protease. (546 aa)    
Predicted Functional Partners:
S7S_04375
Hypothetical protein; COG2373 Large extracellular alpha-helical protein.
  
 
 0.855
S7S_11910
O-antigen polymerase family protein/toluene tolerance protein; COG0515 Serine/threonine protein kinase.
    
 0.810
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.771
S7S_13520
Hypothetical protein; COG2866 Predicted carboxypeptidase.
  
 
 0.525
S7S_16885
Proteinase inhibitor I2.
  
     0.512
S7S_06195
Hypothetical protein.
  
     0.495
S7S_14070
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
  
 
 0.487
S7S_17075
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
  
 
 0.486
S7S_07600
Cartilage oligomeric matrix protein.
  
     0.467
S7S_16860
COG2124 Cytochrome P450.
 
 
 
 0.465
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.