Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
S7S_03790 | S7S_04165 | Hypothetical protein; COG2984 ABC-type uncharacterized transport system, periplasmic component. | COG3313 Predicted Fe-S protein. | 0.662 |
S7S_03790 | S7S_09955 | Hypothetical protein; COG2984 ABC-type uncharacterized transport system, periplasmic component. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.580 |
S7S_04165 | S7S_03790 | COG3313 Predicted Fe-S protein. | Hypothetical protein; COG2984 ABC-type uncharacterized transport system, periplasmic component. | 0.662 |
S7S_04165 | S7S_09955 | COG3313 Predicted Fe-S protein. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.627 |
S7S_05765 | S7S_09955 | COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A). | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.453 |
S7S_09945 | S7S_09950 | SecC motif-containing protein; COG3012 Uncharacterized protein conserved in bacteria. | Hydrolase; COG1335 Amidases related to nicotinamidase. | 0.771 |
S7S_09945 | S7S_09955 | SecC motif-containing protein; COG3012 Uncharacterized protein conserved in bacteria. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.552 |
S7S_09950 | S7S_09945 | Hydrolase; COG1335 Amidases related to nicotinamidase. | SecC motif-containing protein; COG3012 Uncharacterized protein conserved in bacteria. | 0.771 |
S7S_09950 | S7S_09955 | Hydrolase; COG1335 Amidases related to nicotinamidase. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.562 |
S7S_09955 | S7S_03790 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein; COG2984 ABC-type uncharacterized transport system, periplasmic component. | 0.580 |
S7S_09955 | S7S_04165 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | COG3313 Predicted Fe-S protein. | 0.627 |
S7S_09955 | S7S_05765 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A). | 0.453 |
S7S_09955 | S7S_09945 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | SecC motif-containing protein; COG3012 Uncharacterized protein conserved in bacteria. | 0.552 |
S7S_09955 | S7S_09950 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hydrolase; COG1335 Amidases related to nicotinamidase. | 0.562 |