STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_10515Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein; COG0110 Acetyltransferase (isoleucine patch superfamily). (181 aa)    
Predicted Functional Partners:
S7S_10645
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.990
S7S_10510
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 0.986
S7S_10485
DegT/DnrJ/EryC1/StrS family aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.939
S7S_10655
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.876
S7S_10410
Polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.859
cysM
COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.845
S7S_10535
Polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.833
S7S_10530
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  
 0.832
S7S_10520
COG0438 Glycosyltransferase.
 
  
 0.803
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.803
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.