STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_11080COG0695 Glutaredoxin and related proteins. (251 aa)    
Predicted Functional Partners:
S7S_11620
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.672
S7S_04275
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.643
S7S_09450
Acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.633
S7S_06815
Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
     0.591
S7S_01385
Hypothetical protein.
  
 
   0.589
S7S_17395
HTH-type transcriptional repressor Bm3R1; COG1309 Transcriptional regulator.
  
     0.567
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.542
S7S_10325
COG4399 Uncharacterized protein conserved in bacteria.
  
     0.532
S7S_18395
Acyltransferase.
  
     0.507
S7S_16305
Hypothetical protein; COG3687 Predicted metal-dependent hydrolase.
  
     0.506
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.