STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_12600Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component. (372 aa)    
Predicted Functional Partners:
S7S_12605
COG0845 Membrane-fusion protein.
 
  
 0.956
S7S_12610
COG1538 Outer membrane protein.
 
   
 0.945
S7S_12595
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
    
0.928
S7S_17215
COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.829
S7S_17220
Hemolysin D; COG0845 Membrane-fusion protein.
 
     0.779
S7S_12590
COG0477 Permeases of the major facilitator superfamily.
       0.476
S7S_12585
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.436
S7S_05310
COG3321 Polyketide synthase modules and related proteins.
  
  
 0.427
S7S_16320
COG1765 Predicted redox protein, regulator of disulfide bond formation.
  
  
 0.427
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.