STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
S7S_13335ferredoxin--NAD(+) reductase FAD/NAD(P)-binding protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (337 aa)    
Predicted Functional Partners:
S7S_05965
COG0369 Sulfite reductase, alpha subunit (flavoprotein).
   
 0.983
S7S_13080
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.969
gltD
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.966
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.965
S7S_09770
COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.953
S7S_15825
COG2897 Rhodanese-related sulfurtransferase.
    
 0.914
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
 0.911
S7S_13500
Thiosulfate sulfurtransferase glpE; COG0607 Rhodanese-related sulfurtransferase.
   
 0.910
S7S_05310
COG3321 Polyketide synthase modules and related proteins.
  
 0.891
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.885
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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