STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7S_14715Flagellar protein FliJ; COG2882 Flagellar biosynthesis chaperone. (153 aa)    
Predicted Functional Partners:
S7S_14710
ATPase FliI/YscN; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
  
 
 0.997
S7S_14720
COG3144 Flagellar hook-length control protein.
 
  
 0.994
S7S_14725
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.994
S7S_14705
Flagellar assembly protein FliH; COG1317 Flagellar biosynthesis/type III secretory pathway protein.
 
  
 0.993
S7S_14740
COG3190 Flagellar biogenesis protein.
 
  
 0.988
S7S_14695
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.987
S7S_14700
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.986
fliE
COG1677 Flagellar hook-basal body protein.
 
  
 0.969
S7S_14730
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.967
flgD
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.962
Your Current Organism:
Alcanivorax pacificus
NCBI taxonomy Id: 391936
Other names: A. pacificus W11-5, Alcanivorax pacificus W11-5, Alcanivorax sp. W11-5
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