Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NA2_00100 | NA2_00105 | NA2_00100 | NA2_00105 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.973 |
| NA2_00100 | NA2_00115 | NA2_00100 | NA2_00115 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.816 |
| NA2_00100 | NA2_00245 | NA2_00100 | NA2_00245 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaI. | 0.851 |
| NA2_00100 | NA2_00250 | NA2_00100 | NA2_00250 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.833 |
| NA2_00100 | NA2_00255 | NA2_00100 | NA2_00255 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.786 |
| NA2_00100 | NA2_03267 | NA2_00100 | NA2_03267 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.717 |
| NA2_00100 | NA2_07794 | NA2_00100 | NA2_07794 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.726 |
| NA2_00100 | NA2_07964 | NA2_00100 | NA2_07964 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Hypothetical protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.764 |
| NA2_00100 | paaA | NA2_00100 | NA2_00235 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaA. | 0.926 |
| NA2_00100 | paaB | NA2_00100 | NA2_00240 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.836 |
| NA2_00105 | NA2_00100 | NA2_00105 | NA2_00100 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.973 |
| NA2_00105 | NA2_00115 | NA2_00105 | NA2_00115 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.907 |
| NA2_00105 | NA2_00245 | NA2_00105 | NA2_00245 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaI. | 0.946 |
| NA2_00105 | NA2_00250 | NA2_00105 | NA2_00250 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Phenylacetic acid degradation protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.940 |
| NA2_00105 | NA2_00255 | NA2_00105 | NA2_00255 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.919 |
| NA2_00105 | NA2_07964 | NA2_00105 | NA2_07964 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Hypothetical protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.718 |
| NA2_00105 | paaA | NA2_00105 | NA2_00235 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaA. | 0.938 |
| NA2_00105 | paaB | NA2_00105 | NA2_00240 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.943 |
| NA2_00115 | NA2_00100 | NA2_00115 | NA2_00100 | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.816 |
| NA2_00115 | NA2_00105 | NA2_00115 | NA2_00105 | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.907 |
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