STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_00425Hypothetical protein; COG5462 Predicted secreted (periplasmic) protein. (122 aa)    
Predicted Functional Partners:
NA2_00430
Penicillin-binding protein, transpeptidase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
    0.841
mraZ
Cell division protein MraZ; COG2001 Uncharacterized protein conserved in bacteria; Belongs to the MraZ family.
       0.795
rsmH
16S rRNA m(4)C1402 methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.795
NA2_15834
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.754
NA2_18146
Hypothetical protein.
  
     0.727
NA2_06168
Hypothetical protein.
  
     0.724
NA2_03507
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.723
NA2_05588
Hypothetical protein.
  
     0.717
NA2_11015
Hypothetical protein; COG5480 Predicted integral membrane protein.
  
     0.700
NA2_03387
Hypothetical protein.
  
     0.697
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.