STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_00790COG0673 Predicted dehydrogenases and related proteins. (311 aa)    
Predicted Functional Partners:
NA2_00795
Protocatechuate 4,5-dioxygenase.
 
  
 0.948
NA2_00800
Protocatechuate 4,5-dioxygenase subunit alpha.
 
  
  0.947
NA2_00835
COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 0.909
NA2_00785
Putative dehydrogenase, with NAD binding domain; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
     0.885
NA2_01604
Xylose isomerase; COG1082 Sugar phosphate isomerases/epimerases.
  
 
 0.782
NA2_00825
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
 
   
 0.731
NA2_02754
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
  0.661
NA2_08936
NAD-dependent epimerase/dehydratase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
  0.661
NA2_00805
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.618
NA2_05833
Aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.607
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.