STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_00800Protocatechuate 4,5-dioxygenase subunit alpha. (126 aa)    
Predicted Functional Partners:
NA2_00795
Protocatechuate 4,5-dioxygenase.
 
  
 0.981
NA2_00790
COG0673 Predicted dehydrogenases and related proteins.
 
  
  0.947
NA2_00835
COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 0.924
NA2_00785
Putative dehydrogenase, with NAD binding domain; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
     0.913
NA2_00830
COG2828 Uncharacterized protein conserved in bacteria.
 
  
 0.887
NA2_00805
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.859
NA2_00825
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
 
   
 0.806
NA2_00145
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.755
NA2_00815
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.731
NA2_15484
Phthalate 4,5-dioxygenase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
 0.715
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.