STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_01120COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
NA2_14727
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.759
NA2_02504
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.745
NA2_20724
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.734
NA2_14707
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.729
NA2_12798
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
NA2_12019
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.674
NA2_01125
Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.
       0.645
NA2_16717
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.643
NA2_18245
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.638
NA2_14857
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.630
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.