STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_01430Putative zinc-binding dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. (339 aa)    
Predicted Functional Partners:
NA2_01455
Phenylacetic acid degradation-related protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
    0.802
NA2_01435
AMP-binding domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.785
NA2_01440
Hypothetical protein.
       0.773
NA2_16962
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.715
NA2_01005
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.669
NA2_04846
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.669
NA2_00115
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
   
 0.668
NA2_01445
TRAP-T family transporter, DctQ (4 TMs) subunit.
       0.664
NA2_01450
TRAP-T family protein transporter, DctM (12 TMs) subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.664
NA2_01460
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
  0.583
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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